The detailed information of tRNA gene sequence


Sequence ID>WENV170238736
Genome IDCEQM01234475
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 439
End posion on genome 515
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaagaataat
tRNA gene sequence 
GGGGATGTAGTTTAACTTGGAAGAACGCTCGGTTTGCATCCGAGAGGCTAAGGGTTCAAA
TCCCTTCATCTCCACCA
Downstream region at tRNA end position 
ttcgagattg
Secondary structure (Cloverleaf model)
>WENV170238736	Ala	TGC
                   t      ACCA ttcgagattg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T T C C C     A
      C A A        A      | | | | |     A
    T       T T T G       A A G G G     C
    T       + | | |                 T T
    G       G A A C
      G A A        G     AGGCT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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