The detailed information of tRNA gene sequence


Sequence ID>WENV170238968
Genome IDCEQN01005531
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 8087
End posion on genome 8183
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgatgtgtgt
tRNA gene sequence 
GGGAGTGGATAGTGCCTGGTGGTGTTCGCGGTCTTCAAAACCGTTGCGGGGCTACGTCGT
AGTCCTGGGTGGGTTCGACTCCCACGCACTCCCGCCA
Downstream region at tRNA end position 
actagtgatt
Secondary structure (Cloverleaf model)
>WENV170238968	SeC(p)	TCA
                   t      GCCA actagtgatt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       G T G A       G T G G G     C
    G       + + + |                 T T
    T       T G T T
      G G          C     TGCGGGGCTACGTCGTAGTCCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK