The detailed information of tRNA gene sequence


Sequence ID>WENV170239927
Genome IDCEQN01079618
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 269
End posion on genome 192
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gagtgtattT
tRNA gene sequence 
CTCGATATAGCTCAGTTGGTAGAGCGGAGGACTGTAGTTCCTTAGGTCACTGGTTCAAGT
CCGGTTGTCGAGAGCC
Downstream region at tRNA end position 
Agaatggtct
Secondary structure (Cloverleaf model)
>WENV170239927	Tyr	GTA
                   T      AGCC Agaatggtct
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T
                     T + G
                     A - T          T G
                    T     T G G C C     A
      T G A        A      | | + | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       T
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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