The detailed information of tRNA gene sequence


Sequence ID>WENV170240311
Genome IDCEQN01110876
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 235
End posion on genome 146
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtcataatt
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGCTCGCTTGGAAAGCGGGTAAGGGGGAAACTCCT
TCAAGGGTTCGAATCCCTTTCTCTCCGCCA
Downstream region at tRNA end position 
gtaaaaatat
Secondary structure (Cloverleaf model)
>WENV170240311	Ser	GGA
                   t      GCCA gtaaaaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TAAGGGGGAAACTCCTTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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