The detailed information of tRNA gene sequence


Sequence ID>WENV170240788
Genome IDCEQN01166978
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 7157
End posion on genome 7081
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caatatcaga
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGCTCCCGCTACTA
Downstream region at tRNA end position 
ataaagccct
Secondary structure (Cloverleaf model)
>WENV170240788	Met	CAT
                   a      ACTA ataaagccct
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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