The detailed information of tRNA gene sequence


Sequence ID>WENV170240909
Genome IDCEQN01179652
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 8
End posion on genome 79
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnagcaacc
tRNA gene sequence 
GGCCCCGTGGTGCAATGGTTAGCACATCTGCTTTACACGCAGGGAACCCAAGTTCAATTC
TTGGCGGAGCCAata
Downstream region at tRNA end position 
caggtttcgt
Secondary structure (Cloverleaf model)
>WENV170240909	Val	TAC
                   c      Aata caggtttcgt
                     G - C
                     G - C
                     C - G
                     C   A
                     C - G
                     C - G
                     G - C          T T
                    T     G G T T C     A
      T A A        G      | | | | |     A
    G       C G T G       C C A A G     C
    G       | | | |                 T T
    T       G C A C
      T A          A     GAAC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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