The detailed information of tRNA gene sequence


Sequence ID>WENV170241382
Genome IDCEQN01221928
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 338
End posion on genome 415
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atggcttgct
tRNA gene sequence 
AGCGGGATAGGTTAGCATGGTTCGACCGACGGGCTCATAACCCGTAGATCGATGGTTCAA
ATCCATCTCCCGCTACCA
Downstream region at tRNA end position 
tttacgctct
Secondary structure (Cloverleaf model)
>WENV170241382	Met	CAT
                   t      ACCA tttacgctct
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
    A C G A        A      | | | | |     A
  T         T T G G       G A T G G     C
  G         + | | |                 T T
  G         G A C C
    T T C          G     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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