The detailed information of tRNA gene sequence


Sequence ID>WENV170241387
Genome IDCEQN01228693
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 214
End posion on genome 289
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaaacaacca
tRNA gene sequence 
TCCGCATTAGTCTAGTTGGTCAGGATGCTTCGCTTTCACCGAGGTGGCCCGGGTTCAAAT
CCCGGATGCGGAATCA
Downstream region at tRNA end position 
ttagctatct
Secondary structure (Cloverleaf model)
>WENV170241387	Glu	TTC
                   a      ATCA ttagctatct
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    T       T C T G       C C G G G     C
    G       + | | +                 T T
    G       G G A T
      T C A        G     TGGC
                    C - G
                    T + G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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