The detailed information of tRNA gene sequence


Sequence ID>WENV170241484
Genome IDCEQN01313636
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5
End posion on genome 99
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnattt
tRNA gene sequence 
GGGAATGATTGAGTTGCTGGTGCTCTCCGCGGCCTTCAAAGCCGTTGTCTGTAATTTATT
TGCAGAGCTGGGTTCGATTCCCAGGCGTTCCCGCAa
Downstream region at tRNA end position 
gaaaagcatt
Secondary structure (Cloverleaf model)
>WENV170241484	SeC	TCA
                   t      GCAa gaaaagcatt
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G T        T      | | | | |     G
    T       T G A G       C T G G G     C
    G         | | |                 T T
    G       T C T C
      T G C        C     TGTCTGTAATTTATTTGCAGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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