The detailed information of tRNA gene sequence


Sequence ID>WENV170241536
Genome IDCEQN01342658
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 354
End posion on genome 259
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
attgatttat
tRNA gene sequence 
GGAAACGATTGTGTTCCTGGTGGACACCACGGCCTTCAAAGCCGCTGTTCTGGTGAAGAA
CTGGAAGGTGGGTTCGATTCCCACACGTTTCCGCAA
Downstream region at tRNA end position 
agatatttta
Secondary structure (Cloverleaf model)
>WENV170241536	SeC	TCA
                   t      GCAA agatatttta
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C
                     A   A          T T
                    T     C A C C C     A
      C C T        T      | | | | |     G
    T       T G T G       G T G G G     C
    G       | | | |                 T T
    G       A C A C
      T G G        C     TGTTCTGGTGAAGAACTGGAAG
                    A   C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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