The detailed information of tRNA gene sequence


Sequence ID>WENV170243026
Genome IDCEQO01109307
Search identical group
Phylum/Class[CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 560
End posion on genome 659
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccgcatcaac
tRNA gene sequence 
GGTAGGCGATGCTAGGCTGGTGCCGGCCCTGGTTTTCAAAACCAGTGGGGCGCATTGAAG
AGTGTTGCTCGGTGGGTTCGATTCCCATCGCCTACCGCCA
Downstream region at tRNA end position 
cactcacctt
Secondary structure (Cloverleaf model)
>WENV170243026	SeC(p)	TCA
                   c      GCCA cactcacctt
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    A     T A C C C     A
      C G G        T      + | | | |     G
    T       A T C G       G T G G G     C
    G         + | |                 T T
    G       C G G C
      T G C        C     TGGGGCGCATTGAAGAGTGTTGCTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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