The detailed information of tRNA gene sequence


Sequence ID>WENV170247177
Genome IDCEQQ01020517
Search identical group
Phylum/Class[CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 595
End posion on genome 519
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgggccgctg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGGACCGCTCATAACGGTTTGGTCGCGGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
ttccttcgaa
Secondary structure (Cloverleaf model)
>WENV170247177	Met	CAT
                   g      ACCA ttccttcgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    G + T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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