The detailed information of tRNA gene sequence


Sequence ID>WENV170247609
Genome IDCEQQ01050914
Search identical group
Phylum/Class[CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 628
End posion on genome 552
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cagttaagca
tRNA gene sequence 
GGTGAGGTGGCAGAGCCCGGTTATGCACACGACTGCAGATCGTGACCACGGGAGTTCGAA
TCTCTCCCTCACCACCA
Downstream region at tRNA end position 
atctttttac
Secondary structure (Cloverleaf model)
>WENV170247609	Cys	GCA
                   a      ACCA atctttttac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | + | | |     G
    C       G A C G       G G G A G     C
    C         | | |                 T T
    G       A T G C
      G T T        A     ACCAC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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