The detailed information of tRNA gene sequence


Sequence ID>WENV170248133
Genome IDCEQQ01098175
Search identical group
Phylum/Class[CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 444
End posion on genome 539
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgttaattat
tRNA gene sequence 
GGAGGGGGAACGTGTGCCGGTGCTGCGCCCGGGCTTCAAACCCGGTGAGGGGCGTTAAAC
GTCCTTGGTGGGTTCAACTCCCACCCCCTTCCGCCA
Downstream region at tRNA end position 
aaaatcnnnn
Secondary structure (Cloverleaf model)
>WENV170248133	SeC	TCA
                   t      GCCA aaaatcnnnn
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    A     C A C C C     A
      C G T        A      | | | | |     A
    C       G T G C       G T G G G     C
    G       + + | |                 T T
    G       T G C G
      T G C        C     TGAGGGGCGTTAAACGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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