The detailed information of tRNA gene sequence


Sequence ID>WENV170248843
Genome IDCEQQ01225474
Search identical group
Phylum/Class[CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2
End posion on genome 98
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGGAGCACATCGGTGCTGGTGTGCCGCCTGGACTTCAAATCCAGTGGGCGGATCTAAACA
ATTCGTCGGTGGGTTCGACTCCCACGTGCTTCCGCCA
Downstream region at tRNA end position 
ttattttaat
Secondary structure (Cloverleaf model)
>WENV170248843	SeC(p)	TCA
                   t      GCCA ttattttaat
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G          T C
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G C       G T G G G     C
    G       + | | |                 T T
    T       G C C G
      G T          C     TGGGCGGATCTAAACAATTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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