The detailed information of tRNA gene sequence


Sequence ID>WENV170250519
Genome IDCEQS01157763
Search identical group
Phylum/Class[CEQS] marine metagenome genome assembly TARA_072_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1258
End posion on genome 1347
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgaaattga
tRNA gene sequence 
AGCGGGGTAGAGGAGTCAGGTTATCTCGGTGGGCTCATATCCCATGCTGTCGTAAGACGT
ACGCCGGTTCAAATCCGGTCCCCGCAACCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>WENV170250519	Met	CAT
                   a      ACCA aannnnnnnn
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
    C T G A        A      + | | | |     A
  A         G G A G       G C C G G     C
  G         + | | |                 T T
  G         T C T C
    T T A          G     GCTGTCGTAAGACGTAC
                    G + T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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