The detailed information of tRNA gene sequence


Sequence ID>WENV170253321
Genome IDCEQU01073798
Search identical group
Phylum/Class[CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 180
End posion on genome 256
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagaattgat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCATCGGGCTCATAACCCGAAGGTCGGAGGTTCGAA
TCCTTCCCCCGCTACTA
Downstream region at tRNA end position 
ccgagaaaac
Secondary structure (Cloverleaf model)
>WENV170253321	Met	CAT
                   t      ACTA ccgagaaaac
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | + | | |     G
    C       C G A G       G G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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