The detailed information of tRNA gene sequence


Sequence ID>WENV170256054
Genome IDCEQX01047524
Search identical group
Phylum/Class[CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2175
End posion on genome 2249
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagaccatat
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCTGGTTCGAGTC
CAGTCCCCGCTACTA
Downstream region at tRNA end position 
ctaacccttt
Secondary structure (Cloverleaf model)
>WENV170256054	Met	CAT
                   t      ACTA ctaacccttt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G A C C     A
        G A        A      + | | | |     G
      T     C G A G       G C T G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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