The detailed information of tRNA gene sequence


Sequence ID>WENV170257332
Genome IDCEQX01258985
Search identical group
Phylum/Class[CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 576
End posion on genome 649
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttccgcttc
tRNA gene sequence 
GCCGGAGTAGCTCAGCTGGTTAGAGCAACGGAATCATAATCCGTGTGTCGGGGGTTCAAG
TCCCTCCTCCGGCAtcc
Downstream region at tRNA end position 
cttgagcnnn
Secondary structure (Cloverleaf model)
>WENV170257332	Met	CAT
                   c      Atcc cttgagcnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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