The detailed information of tRNA gene sequence


Sequence ID>WENV170258219
Genome IDCEQY01047220
Search identical group
Phylum/Class[CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 6189
End posion on genome 6272
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgggtgggT
tRNA gene sequence 
GTCTACTTGGCTGAGTGGTTAAGGCGATGGACTGCTAATCCATTGGGGTTTCCCCGCGCA
GGTTCGAATCCTGCAGTAGACGAta
Downstream region at tRNA end position 
attattaaga
Secondary structure (Cloverleaf model)
>WENV170258219	Ser	GCT
                   T      GAta attattaaga
                     G - C
                     T - A
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G T C G       G C A G G     C
    G         + | |                 T T
    T       A G G C
      T A          G     TGGGGTTTCCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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