The detailed information of tRNA gene sequence


Sequence ID>WENV170261238
Genome IDCERB01051077
Search identical group
Phylum/Class[CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 402
End posion on genome 326
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaaaaagatt
tRNA gene sequence 
AGGGGTGTAGCTCTAACTGGCAGAGCGCCGGTCTCCAAAACCGGAGGTTGTGAGTTCGAA
TCTCACCGCCCCTGCTA
Downstream region at tRNA end position 
agaggtaatt
Secondary structure (Cloverleaf model)
>WENV170261238	Trp	CCA
                   t      GCTA agaggtaatt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      A A T        A      | | | | |     G
    C       C T C G       G T G A G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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