The detailed information of tRNA gene sequence


Sequence ID>WENV170262813
Genome IDCERB01344585
Search identical group
Phylum/Class[CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2437
End posion on genome 2361
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
GGGCCTATAGCTCAATTGGTTAGAGCAACAGTCTCATAAACTGTAGGTTTCTGGTTCAAG
TCCAGGTGGGCCCACCA
Downstream region at tRNA end position 
attttataaa
Secondary structure (Cloverleaf model)
>WENV170262813	Met	CAT
                   a      ACCA attttataaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T A A        A      + | | | |     A
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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