The detailed information of tRNA gene sequence


Sequence ID>WENV170264357
Genome IDCERD01027178
Search identical group
Phylum/Class[CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 11342
End posion on genome 11270
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatagtttac
tRNA gene sequence 
GAGCTCATAGTTCAATTGGTAGAACATATCGCTCATAACGGTAATTGTATAGGTTCGATC
CCTATTGGGCTTAaac
Downstream region at tRNA end position 
tccggaaagg
Secondary structure (Cloverleaf model)
>WENV170264357	Met	CAT
                   c      Aaac tccggaaagg
                     G + T
                     A - T
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          C T
                    T     T A T C C     A
      T A A        A      | | | | |     G
    T       C T T G       A T A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          A     ATTGT
                    T - A
                    A - T
                    T + G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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