The detailed information of tRNA gene sequence


Sequence ID>WENV170264457
Genome IDCERD01034798
Search identical group
Phylum/Class[CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5844
End posion on genome 5771
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
taaaagttag
tRNA gene sequence 
GTGAGTATAACTTAATCGGTAGAGTATTAAACTGTGACTTTAAAGGTTGTGGGTTCAAAT
CCCATTGCTTGCCCtc
Downstream region at tRNA end position 
aaatatataa
Secondary structure (Cloverleaf model)
>WENV170264457	His	GTG
                   g      CCtc aaatatataa
                     G - C
                     T + G
                     G + T
                     A - T
                     G - C
                     T + G
                     A - T          T A
                    T     T A C C C     A
      T A A        A      + | | | |     A
    C       T T C A       G T G G G     C
    G       + | | |                 T T
    G       G A G T
      T A          A     AGGTT
                    T - A
                    T - A
                    A - T
                    A - T
                    A - T
                  C       C
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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