The detailed information of tRNA gene sequence


Sequence ID>WENV170264810
Genome IDCERD01071790
Search identical group
Phylum/Class[CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 382
End posion on genome 294
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agacgaatta
tRNA gene sequence 
GCGGGGGTCGCATAGTCTGGCCATTGCGTTGGATTGCTAATCCAATGGGAGTTAATCCCA
CGGGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
agcgatagtg
Secondary structure (Cloverleaf model)
>WENV170264810	Ser	GCT
                   a      GCCA agcgatagtg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G G G G G     C
  G           | | |                 T T
  G         T T G C
    C C A          G     TGGGAGTTAATCCCAC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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