The detailed information of tRNA gene sequence


Sequence ID>WENV170266286
Genome IDCERE01057068
Search identical group
Phylum/Class[CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 16623
End posion on genome 16534
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctaaacttt
tRNA gene sequence 
GGGTCCTTTGCCTAGTGGCCGAAGGCTCTCGGCTCATAACCGAGTACTGTTAATGACACA
TCACTGGTTCGAATCCAGTAGGACCCACCA
Downstream region at tRNA end position 
aatcagaagt
Secondary structure (Cloverleaf model)
>WENV170266286	Met	CAT
                   t      ACCA aatcagaagt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     T G A C C     A
      T G A        T      | | | | |     G
    G       T C C G       A C T G G     C
    G       | | | |                 T T
    C       A G G C
      C G A        T     TACTGTTAATGACACATC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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