The detailed information of tRNA gene sequence


Sequence ID>WENV170266301
Genome IDCERE01057222
Search identical group
Phylum/Class[CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2187
End posion on genome 2277
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caggacacaa
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTTGAACGGGGCGGTCTCGAAAACCGTTGTGCGCTTCACGCGC
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttatcttgta
Secondary structure (Cloverleaf model)
>WENV170266301	Ser	CGA
                   a      GCCA ttatcttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGCGCTTCACGCGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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