The detailed information of tRNA gene sequence


Sequence ID>WENV170267162
Genome IDCERF01014405
Search identical group
Phylum/Class[CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4197
End posion on genome 4286
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attccgcgct
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGCGTATACGTTAACGCGTA
TCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170267162	Ser	GCT
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTAACGCGTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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