The detailed information of tRNA gene sequence


Sequence ID>WENV170267274
Genome IDCERF01038890
Search identical group
Phylum/Class[CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1238
End posion on genome 1165
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcaatgctgt
tRNA gene sequence 
GTTAGGGTGGCCGAGTGGCTAGGCGTCGGTCTGCAACACCGGATAGGTGAGTTCGATTCT
CACCCCTAACTCCA
Downstream region at tRNA end position 
atcctactgt
Secondary structure (Cloverleaf model)
>WENV170267274	Cys	GCA
                   t      TCCA atcctactgt
                     G - C
                     T - A
                     T - A
                     A - T
                     G - C
                     G - C
                     G - C          T T
                    T     C A C T C     A
        G A        G      | | | | |     G
      T     G C C G       G T G A G     C
      G       | | |                 T T
      G     A G G C
        C T        G     ATAG
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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