The detailed information of tRNA gene sequence


Sequence ID>WENV170268301
Genome IDCERG01068224
Search identical group
Phylum/Class[CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 855
End posion on genome 768
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagaatgttT
tRNA gene sequence 
GGAGAGGTGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAAGTGCAAGCTTC
CGTGGGTTCGAATCCCACCTTCTCCGAta
Downstream region at tRNA end position 
tgtattatct
Secondary structure (Cloverleaf model)
>WENV170268301	Ser	TGA
                   T      GAta tgtattatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAAGTGCAAGCTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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