The detailed information of tRNA gene sequence


Sequence ID>WENV170268450
Genome IDCERG01088181
Search identical group
Phylum/Class[CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1118
End posion on genome 1031
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attattacta
tRNA gene sequence 
GGGGAGATCGCATAGAGGCCTAGTGCACCCGCCTGCTAAGTGGGAGGGGTTTTACCCCAC
GCGGGTTCGAATCCCGCTCTCCCCGCCA
Downstream region at tRNA end position 
tataaatatg
Secondary structure (Cloverleaf model)
>WENV170268450	Ser	GCT
                   a      GCCA tataaatatg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        A     AGGGGTTTTACCCCAC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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