The detailed information of tRNA gene sequence


Sequence ID>WENV170268657
Genome IDCERG01111563
Search identical group
Phylum/Class[CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 202
End posion on genome 132
Amino Acid Stop
Anticodon TTA
Upstream region at tRNA start position 
gcttccttgg
tRNA gene sequence 
ACTGCTGTGTTCTAATGGTAGGAATCACGACTTTAGCTCGTGCAGTCGGCGTTCGATTCG
CTGCGGCAGAGaga
Downstream region at tRNA end position 
aggcatcgga
Secondary structure (Cloverleaf model)
>WENV170268657	Stop	TTA
                   g      Gaga aggcatcgga
                     A   A
                     C - G
                     T - A
                     G - C
                     C - G
                     T + G
                     G - C          T T
                    T     G T C G C     A
        A A        G      | + | | |     G
      T     T C T T       C G G C G     C
      G     + | | |                 T T
      G     G G A A
        T A        T     CAGT
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       C
                  T       G
                    T T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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