The detailed information of tRNA gene sequence


Sequence ID>WENV170272739
Genome IDCERL01012353
Search identical group
Phylum/Class[CERL] marine metagenome genome assembly TARA_068_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 279
End posion on genome 354
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcggggcat
tRNA gene sequence 
AGGGCAGTGGCTCAACTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGGGGGTTCGAGT
CCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
aggcgctgcg
Secondary structure (Cloverleaf model)
>WENV170272739	Trp	CCA
                   t      GCCA aggcgctgcg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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