The detailed information of tRNA gene sequence


Sequence ID>WENV170273935
Genome IDCERL01200192
Search identical group
Phylum/Class[CERL] marine metagenome genome assembly TARA_068_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 555
End posion on genome 626
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attattcaac
tRNA gene sequence 
GGGCCTGTGGCGCAATGGTAGCGCGTCTGACTCCAGTTCAGAAGGTTGCGTGTTCAACTC
ACGTCGGGCTCAact
Downstream region at tRNA end position 
tctgtttttt
Secondary structure (Cloverleaf model)
>WENV170273935	Trp	CCA
                   c      Aact tctgtttttt
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T C
                    T     T G C A C     A
        A A        G      + | | | |     A
      T     C G C G       G C G T G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       T
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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