The detailed information of tRNA gene sequence


Sequence ID>WENV170275717
Genome IDCERM01195065
Search identical group
Phylum/Class[CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 179
End posion on genome 90
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccagtagaat
tRNA gene sequence 
GGTGAAGTGGGTGAGTGGCTTAAACCACCAGTTTGCTAAACTGGCGTGCTGGAAACGGTA
CCGGGGGTTCGAATCCCTCCTTCACCGCAA
Downstream region at tRNA end position 
aaaaatacat
Secondary structure (Cloverleaf model)
>WENV170275717	Ser	GCT
                   t      GCAA aaaaatacat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTGCTGGAAACGGTACC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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