The detailed information of tRNA gene sequence


Sequence ID>WENV170275942
Genome IDCERM01237180
Search identical group
Phylum/Class[CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1506
End posion on genome 1432
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtccagtat
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAATTC
CTGTCCCCGCTACCA
Downstream region at tRNA end position 
attaaactcg
Secondary structure (Cloverleaf model)
>WENV170275942	Met	CAT
                   t      ACCA attaaactcg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     T G T C C     A
        G A        A      + | | | |     A
      T     C G A G       G C A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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