The detailed information of tRNA gene sequence


Sequence ID>WENV170276275
Genome IDCERN01017620
Search identical group
Phylum/Class[CERN] marine metagenome genome assembly TARA_066_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 633
End posion on genome 557
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctaaaatat
tRNA gene sequence 
TGCGCTGTGGAGCAGTTGGTCAGCTCGCAAGGCTCATAACCTTGAGGTCGCAGGTTCGAA
TCCTGCTGGCGCACCTA
Downstream region at tRNA end position 
aaaataataa
Secondary structure (Cloverleaf model)
>WENV170276275	Met	CAT
                   t      CCTA aaaataataa
                     T - A
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     G + T          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T C A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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