The detailed information of tRNA gene sequence


Sequence ID>WENV170289597
Genome IDCERX01203571
Search identical group
Phylum/Class[CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1
End posion on genome 92
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGGGGTGGGTGAGTGGCTGAAACCAGTGGTTTGCTAAACCGCCGAAGGGGTAATACTC
TTCCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
tataaggttt
Secondary structure (Cloverleaf model)
>WENV170289597	Ser	GCT
                   n      GCCA tataaggttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGAAGGGGTAATACTCTTCC
                    G - C
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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