The detailed information of tRNA gene sequence


Sequence ID>WENV170290034
Genome IDCERY01072083
Search identical group
Phylum/Class[CERY] marine metagenome genome assembly TARA_065_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 618
End posion on genome 710
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accacttata
tRNA gene sequence 
GGTAGGGTGGCAGAGAGGTTTAATGCAGTTGTTTGCTAAACAACCGTAGATCATAAAGGT
CTACCGTAGGTTCGAATCCTACTCCTACCGCCA
Downstream region at tRNA end position 
ttttttccta
Secondary structure (Cloverleaf model)
>WENV170290034	Ser	GCT
                   a      GCCA ttttttccta
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C A T C C     A
      A G A        G      | | | | |     G
    G       G A C G       G T A G G     C
    G         | | |                 T T
    T       A T G C
      T T A        A     CGTAGATCATAAAGGTCTACC
                    G - C
                    T - A
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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