The detailed information of tRNA gene sequence


Sequence ID>WENV170290226
Genome IDCERZ01031368
Search identical group
Phylum/Class[CERZ] marine metagenome genome assembly TARA_082_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 554
End posion on genome 465
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagtggatac
tRNA gene sequence 
GGAAGATTGGGTGAGAGGCTTAAACCAGTAGTTTGCTAAATTGCCGTGGGGGTAACCCCA
CCGTGGGTTCGAATCCCACATCTTCCGCCA
Downstream region at tRNA end position 
ttatcccata
Secondary structure (Cloverleaf model)
>WENV170290226	Ser	GCT
                   c      GCCA ttatcccata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G T G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTGGGGGTAACCCCACC
                    G - C
                    T + G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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