The detailed information of tRNA gene sequence


Sequence ID>WENV170290689
Genome IDCESA01042354
Search identical group
Phylum/Class[CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 271
End posion on genome 343
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agcttatttt
tRNA gene sequence 
TGTTTTGTTACATAAGTGGTTAATGTGGTAAATTGCAAATTTATTTATAATAGTTCGAAT
CTATTCAAAACCTgga
Downstream region at tRNA end position 
tatataactt
Secondary structure (Cloverleaf model)
>WENV170290689	Cys	GCA
                   t      Tgga tatataactt
                     T   C
                     G - C
                     T - A
                     T - A
                     T - A
                     T - A
                     G - C          T A
                    T     T T A T C     A
      G A A        T      | | | | |     G
    T       T A C A       A A T A G     C
    G       | | | |                 T T
    G       A T G T
      T T A        G     TTAT
                    G + T
                    T - A
                    A - T
                    A - T
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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