The detailed information of tRNA gene sequence


Sequence ID>WENV170291040
Genome IDCESA01078792
Search identical group
Phylum/Class[CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 117
End posion on genome 29
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcgctatta
tRNA gene sequence 
GAAAAGATGACTGAGAGGTTTAAAGTATTGGTTTGCTAAATCAACGTATATTTTCAAATA
TACCATGGGTTCGAATCCCATTCTTTTCGgaa
Downstream region at tRNA end position 
tatttaatat
Secondary structure (Cloverleaf model)
>WENV170291040	Ser	GCT
                   a      Ggaa tatttaatat
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     T A C C C     A
      A G A        G      | | | | |     G
    G       G T C A       A T G G G     C
    G         | | |                 T T
    T       A A G T
      T T A        A     CGTATATTTTCAAATATACC
                    T - A
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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