The detailed information of tRNA gene sequence


Sequence ID>WENV170291655
Genome IDCESA01156739
Search identical group
Phylum/Class[CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 170
End posion on genome 242
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tttgtatgta
tRNA gene sequence 
AGGTAACTAACTCAATTGGTAGAGTATCTCGCTTACAACGAGAAGGTTAGTGGTTCAAGT
CTGCTGTTACCTAgat
Downstream region at tRNA end position 
aaaaagtatt
Secondary structure (Cloverleaf model)
>WENV170291655	Val	TAC
                   a      Agat aaaaagtatt
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T
                     A - T
                     C - G          T G
                    T     T C G T C     A
      T A A        A      | | + + |     A
    T       C T C A       A G T G G     C
    G       | | | |                 T T
    G       G A G T
      T A          A     AGGTT
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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