The detailed information of tRNA gene sequence


Sequence ID>WENV170291769
Genome IDCESA01203853
Search identical group
Phylum/Class[CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 287
End posion on genome 214
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gataccggct
tRNA gene sequence 
AGCACCTTGGCGCAGTGGATAGCGTGCTGGGCTCATAACTCAGAGGTCCCTGGATCGAGA
CCAGGAGGTGCTACac
Downstream region at tRNA end position 
ttcgtttttt
Secondary structure (Cloverleaf model)
>WENV170291769	Met	CAT
                   t      ACac ttcgtttttt
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          A G
                    T     G G A C C     A
      T G A        G      | | | | |     G
    G       C G C G       C C T G G     C
    G       | | | +                 A T
    A       G C G T
      T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G + T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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