The detailed information of tRNA gene sequence


Sequence ID>WENV170294388
Genome IDCESC01069546
Search identical group
Phylum/Class[CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 462
End posion on genome 373
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgtatattt
tRNA gene sequence 
GGAAGCTTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAATTGCCAAAGGAGCAATCCTT
TCGAGAGTTCGAATCTCTCAGCTTCCGCCA
Downstream region at tRNA end position 
ttagtataat
Secondary structure (Cloverleaf model)
>WENV170294388	Ser	GCT
                   t      GCCA ttagtataat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CAAAGGAGCAATCCTTTC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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