The detailed information of tRNA gene sequence


Sequence ID>WENV170296001
Genome IDCESD01098840
Search identical group
Phylum/Class[CESD] marine metagenome genome assembly TARA_098_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1
End posion on genome 93
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGATGCTAGAGTGGTTTAATAGGCGGGCCTGGAAAGCTCGTGTTCCGGTAATATCG
GAACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ctatttttgt
Secondary structure (Cloverleaf model)
>WENV170296001	Ser	GGA
                   n      GCCA ctatttttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G G G G G     C
    G         | | |                 T T
    T       A T A G
      T T A        G     TGTTCCGGTAATATCGGAACC
                    C - G
                    G - C
                    G + T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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