The detailed information of tRNA gene sequence


Sequence ID>WENV170296259
Genome IDCESD01244564
Search identical group
Phylum/Class[CESD] marine metagenome genome assembly TARA_098_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 262
End posion on genome 339
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatttgtgct
tRNA gene sequence 
GGTCTCATCGTCTAGTTAGGCCTAGGACGCCTGCCTGTCACGCAGGTAACATGGGTTCAA
ATCCCATTGAGACCGCCA
Downstream region at tRNA end position 
gaaaaaaact
Secondary structure (Cloverleaf model)
>WENV170296259	Asp	GTC
                   t      GCCA gaaaaaaact
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     T A C C C     A
    T T G A        C      | | | | |     A
  A         T C T G       A T G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        G     TAAC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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