The detailed information of tRNA gene sequence


Sequence ID>WENV170296550
Genome IDCESE01017886
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 348
End posion on genome 275
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gttaaatcat
tRNA gene sequence 
GGCTGGATGGCAGAGTGGTTATGCACCGGCCTGCAAAGCCGTTAACTCCGGTTCGATTCC
GGATTCAGCCTCCA
Downstream region at tRNA end position 
atatttattt
Secondary structure (Cloverleaf model)
>WENV170296550	Cys	GCA
                   t      TCCA atatttattt
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G + T
                     A - T          T T
                    T     A G G C C     A
        G A        G      | | | | |     G
      T     G A C G       T C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     TAAC
                    C   T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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