The detailed information of tRNA gene sequence


Sequence ID>WENV170297393
Genome IDCESE01146433
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 823
End posion on genome 907
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcataaaaa
tRNA gene sequence 
GGAAAGGTGGCTGAGTGGTTTAAAGCGACGCTTTGCTAAGGCGTTATATGATAAATATCG
TGGGTTCAAATCCCATTCTTTCCTCtg
Downstream region at tRNA end position 
ttaaaaaata
Secondary structure (Cloverleaf model)
>WENV170297393	Ser	GCT
                   a      TCtg ttaaaaaata
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G + T          T A
                    T     T A C C C     A
      T G A        G      + | | | |     A
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TATATGATAAATATC
                    A - T
                    C - G
                    G - C
                    C - G
                    T + G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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