The detailed information of tRNA gene sequence


Sequence ID>WENV170297434
Genome IDCESE01148732
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2787
End posion on genome 2703
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attcgttatA
tRNA gene sequence 
AGATAGTTGGCTGAGCGGTTTAAGGCGTACGTTTTGAAAACGTAAGCACGAAGGTGTCGT
GAGTTCGAATCTCATACTATCTTTtc
Downstream region at tRNA end position 
ctatttgtaa
Secondary structure (Cloverleaf model)
>WENV170297434	Ser	TGA
                   A      TTtc ctatttgtaa
                     A - T
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     T - A          T A
                    T     T A C T C     A
      C G A        G      + | | | |     G
    G       G T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     AGCACGAAGGTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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